Yarp compilation error

[EgorLakomkin]

Hello,

While building yarp on Ubuntu 16.04.1 LTS I got this error. I have libtiff5-dev, libtiff5 libraries installed. What could be a problem?

[ 71%] Linking CXX executable ../../bin/yarpdatadumper /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference toTIFFReadDirectory@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference to TIFFWriteEncodedStrip@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference toTIFFIsTiled@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference to TIFFOpen@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference toTIFFReadEncodedStrip@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference to TIFFSetField@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference toTIFFWriteScanline@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference to TIFFGetField@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference toTIFFScanlineSize@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference to TIFFNumberOfStrips@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference toTIFFSetWarningHandler@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference to TIFFSetErrorHandler@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference toTIFFReadEncodedTile@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference to TIFFReadRGBATile@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference toTIFFClose@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference to TIFFRGBAImageOK@LIBTIFF_4.0' /opt/ros/kinetic/lib/libopencv_imgcodecs3.so.3.1.0: undefined reference toTIFFReadRGBAStrip@LIBTIFF_4.0' collect2: error: ld returned 1 exit status src/yarpdatadumper/CMakeFiles/yarpdatadumper.dir/build.make:140: recipe for target 'bin/yarpdatadumper' failed`

[towardthesea]

Hi @EgorLakomkin , It seems that yarp found the opencv from ros-kinetic rather than the normal one.

Have you tried to install icub-common by $ sudo apt-get install icub-common, then changed the OpenCV path in yarp configuration to the "new" OpenCV from icub-common.

I don't know clearly but there seems some difference between official OpenCV and the one from ros-kinetic

Cheers, Phuong

[pattacini]

It seems that we are here in a different condition than #3, since on the VM Yarp compiles just fine against /opt/ros/kinect/share/OpenCV-3.1.0-dev (indeed Yarp is already opencv-3.x.y friendly).

However, @EgorLakomkin you could follow @towardthesea's suggestion and give a try to:

$ cd $ROBOT_CODE/yarp/build
$ rm * -rf
$ cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=$ROBOT_INSTALL -DCREATE_GUIS=ON -DCREATE_LIB_MATH=ON -DOpenCV_DIR=/usr/share/OpenCV ../
$ make install

which will basically tell Yarp to link against official version of OpenCV for Xenial, that is the one installed along with the icub-common package.

[pattacini]

@EgorLakomkin we could troubleshoot this problem together tomorrow, but I also suggest you to get ready with the VM.

[EgorLakomkin]

@pattacini @towardthesea Thank you for your help! I advanced further, but still have problems with open cv.

Now it cannot find headers of OpenCV /opt/ros/kinetic/include/opencv: No such file or directory

Full error listing: [ 94%] Building CXX object src/yarpdataplayer/CMakeFiles/yarpdataplayer.dir/src/aboutdlg.cpp.o cc1plus: warning: /opt/ros/kinetic/include/opencv: No such file or directory [-Wmissing-include-dirs] [ 94%] Building CXX object src/yarpdataplayer/CMakeFiles/yarpdataplayer.dir/src/genericinfodlg.cpp.o cc1plus: warning: /opt/ros/kinetic/include/opencv: No such file or directory [-Wmissing-include-dirs] [ 95%] Building CXX object src/yarpdataplayer/CMakeFiles/yarpdataplayer.dir/src/loadingwidget.cpp.o cc1plus: warning: /opt/ros/kinetic/include/opencv: No such file or directory [-Wmissing-include-dirs] [ 95%] Building CXX object src/yarpdataplayer/CMakeFiles/yarpdataplayer.dir/src/main.cpp.o cc1plus: warning: /opt/ros/kinetic/include/opencv: No such file or directory [-Wmissing-include-dirs] In file included from /home/egor/robot-code/yarp/src/yarpdataplayer/include/utils.h:32:0, from /home/egor/robot-code/yarp/src/yarpdataplayer/include/mainwindow.h:16, from /home/egor/robot-code/yarp/src/yarpdataplayer/src/main.cpp:1: /home/egor/robot-code/yarp/src/yarpdataplayer/include/worker.h:33:18: fatal error: cv.h: No such file or directory compilation terminated. src/yarpdataplayer/CMakeFiles/yarpdataplayer.dir/build.make:169: recipe for target 'src/yarpdataplayer/CMakeFiles/yarpdataplayer.dir/src/main.cpp.o' failed make[2]: *** [src/yarpdataplayer/CMakeFiles/yarpdataplayer.dir/src/main.cpp.o] Error 1 CMakeFiles/Makefile2:3419: recipe for target 'src/yarpdataplayer/CMakeFiles/yarpdataplayer.dir/all' failed make[1]: *** [src/yarpdataplayer/CMakeFiles/yarpdataplayer.dir/all] Error 2 Makefile:149: recipe for target 'all' failed make: *** [all] Error 2

[pattacini]

Hi @EgorLakomkin

Did you make sure you purged the previous compilation products outright and started from scratch again?

I'm asking 'cause if you configure Yarp to compile against /usr/share/OpenCV as suggested above (i.e. the cmake option -DOpenCV_DIR=/usr/share/OpenCV), then you should no longer have any reference to /opt/ros/kinetic/include/opencv.

[towardthesea]

@EgorLakomkin please remove the CMakeCache or the whole old build folder before following the manual of @patacini

[EgorLakomkin]

It worked, thank you!

[pattacini]

Great!