Fixes #1198 => in those cases in which the first wake time needs to be detected in part 5 (with g.part5.addfirstwake) and no sustained inactivity bouts have been detected from the begining of the recording until the first detected night, then GGIR struggled to define the first wake up and triggered an error.
This scenario is very rare, and most likely in those study protocols in which the recordings start early in the morning and participants do not wear the devices durint nighttime.
Checklist before merging:
[x] Existing tests still work (check by running the test suite, e.g. from RStudio).
[ ] Added tests (if you added functionality) or fixed existing test (if you fixed a bug).
[x] Clean code has been attempted, e.g. intuitive object names and no code redundancy.
[ ] Documentation updated:
[ ] Function documentation
[ ] Chapter vignettes for GitHub IO
[ ] Vignettes for CRAN
[ ] Corresponding issue tagged in PR message. If no issue exist, please create an issue and tag it.
[x] Updated release notes in inst/NEWS.Rd with a user-readable summary. Please, include references to relevant issues or PR discussions.
[ ] Added your name to the contributors lists in the DESCRIPTION file, if you think you made a significant contribution.
[ ] GGIR parameters were added/removed. If yes, please also complete checklist below.
If NEW GGIR parameter(s) were added then these NEW parameter(s) are:
[ ] documented in man/GGIR.Rd
[ ] included with a default in R/load_params.R
[ ] included with value class check in R/check_params.R
[ ] included in table of vignettes/GGIRParameters.Rmd with references to the GGIR parts the parameter is used in.
[ ] mentioned in NEWS.Rd as NEW parameter
If GGIR parameter(s) were deprecated these parameter(s) are:
[ ] documented as deprecated in man/GGIR.Rd
[ ] removed from R/load_params.R
[ ] removed from R/check_params.R
[ ] removed from table in vignettes/GGIRParameters.Rmd
[ ] mentioned as deprecated parameter in NEWS.Rd
[ ] added to the list in R/extract_params.R with deprecated parameters such that these do not produce warnings when found in old config.csv files.
Fixes #1198 => in those cases in which the first wake time needs to be detected in part 5 (with
g.part5.addfirstwake) and no sustained inactivity bouts have been detected from the begining of the recording until the first detected night, then GGIR struggled to define the first wake up and triggered an error.This scenario is very rare, and most likely in those study protocols in which the recordings start early in the morning and participants do not wear the devices durint nighttime.
Checklist before merging:
inst/NEWS.Rdwith a user-readable summary. Please, include references to relevant issues or PR discussions.DESCRIPTIONfile, if you think you made a significant contribution.If NEW GGIR parameter(s) were added then these NEW parameter(s) are:
man/GGIR.RdR/load_params.RR/check_params.Rvignettes/GGIRParameters.Rmdwith references to the GGIR parts the parameter is used in.If GGIR parameter(s) were deprecated these parameter(s) are:
man/GGIR.RdR/load_params.RR/check_params.Rvignettes/GGIRParameters.RmdR/extract_params.Rwith deprecated parameters such that these do not produce warnings when found in old config.csv files.