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waggle-sensor / data-tools

Data tools for working with Waggle data.
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Error: File missing from input directory path #1

Closed MikeWHolloway closed 6 years ago

MikeWHolloway commented 6 years ago

I am unable to use the dataReduction.py tool to process some unpackaged AoT data.

I've tested the absolute path of the unpackaged directory in the python3 interpreter but cannot get the reduction tool to work from command line.

os.path.exists('/home/porlando/aot/AoT_Portland.complete.2018-07-03') True

python3 dataReduction.py -i /home/porlando/aot/AoT_Portland.complete.2018-07-03 -t 10m Error: Files missing from input directory path.

I get the same error when enveloping the absolute path in quotes as well...

python3 dataReduction.py -i '/home/porlando/aot/AoT_Portland.complete.2018-07-03' -t 10m Error: Files missing from input directory path.

Any help is appreciated!

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rajeshxsankaran commented 6 years ago

@MikeWHolloway can you give me a ls of your /home/porlando/aot/AoT_Portland.complete.2018-07-03 directory? Is the CSV.gz file unzipped?

MikeWHolloway commented 6 years ago

I figured it out! The unpacked AoT_Portland.complete.2018-07-03 created a directory called data.csv with the file data.csv nested inside. After looking through the dataReduction.py source, I realized that it is expecting a file and not a dir for data.csv. Thanks for the quick response Raj!

rajeshxsankaran commented 6 years ago

Sure thing. Close the issue when you succeed :).

amorrison9796 commented 6 years ago

Glad you got it figured out!