search

walaj / SeqLib

C++ htslib/bwa-mem/fermi interface for interrogating sequence data
http://bioinformatics.oxfordjournals.org/content/early/2016/12/21/bioinformatics.btw741.full.pdf+html
Other
132 stars 36 forks source link

Wrong header included and implicit type conversion error #3

Closed SHuang-Broad closed 8 years ago

SHuang-Broad commented 8 years ago

Hi Jeremiah,

Two issues discovered:

  1. In SGA/Util/gzstream.C, the first include is referring to the wrong header (leading to "fatal error, file not found"), which probably should be

    include "gzstream.h"

  2. More likely an SGA issue. See https://github.com/jts/sga/issues/108.

Steve