Closed lgeistlinger closed 1 year ago
The body site should be updated to "Feces" for all experiments of these studies:
https://bugsigdb.org/Study_467 https://bugsigdb.org/Study_687
Hi, both of these studies have now been updated!
Great, thanks!
Hi @claregri @ftzohra22 - we have a solution in place for https://github.com/waldronlab/BugSigDB/issues/148, ie autocomplete for body site should work now. Can you be so good and proceed with the clean-up of studies associated with oral gland, major salivary gland, saliva-secreting gland, buccal gland, and mucosa, as outlined in my post above? Many thanks!
All body sites have been cleaned up accordingly
@claregri @ftzohra22 from the review of body sites in BugSigDB, it figures that some review + clean up is needed on studies annotated with the following sites:
Note that we would only annotate the gland if indeed tissue from these glands (eg in case of a specific cancer in that gland) would have been taken, often enough those are just "saliva" samples
Note further that a clean-up seems currently dependent on #148 being resolved first.