waldronlab / BugSigDB

A microbial signatures database
https://bugsigdb.org
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Experiments and Signatures temporarily not displaying after edit #196

Open SvetlanaUP opened 9 months ago

SvetlanaUP commented 9 months ago

In https://bugsigdb.org/Study_798 only Study info section is visible.

lwaldron commented 9 months ago

From #197 :

In https://bugsigdb.org/Study_825 there are three experiments but the edits to the second and third aren't rendering. After clearing browser cache and even log-out and log-in, the issue still persists.

@SvetlanaUP can you specify what edits to experiments in https://bugsigdb.org/Study_825 aren't rendering, so we'll know if we're seeing the version with or without edits?

lwaldron commented 9 months ago

In https://bugsigdb.org/Study_798 I can see the experiments and signatures, but earlier this morning I also saw only the study. So there seem to be sub-pages temporarily disappearing after some action - @SvetlanaUP you said it was following marking something reviewed? Any details you can recall about actions you took preceding the experiments and signatures temporarily disappearing will be helpful. I also heard a similar report from a curator following editing.

SvetlanaUP commented 9 months ago

After clicking on "Mark reviewed" to approve curations of Experiment 1, Signature 1 and Signature 2 sections disappeared, one by one, after each click. HTH.

SvetlanaUP commented 9 months ago

As for bug in https://bugsigdb.org/Study_825, the following edits were problematic: most of the info about the subjects and also statistical analysis.

tosfos commented 9 months ago

We haven't been able to reproduce this issue. Does anyone have a way that reliably reproduces the problem?

We believe this is a bug in one of the extensions we are using to help update the semantic dependencies. We can try to track it down, but it may be a significant project. We did try to switch to a different solution for the dependency updates, but it caused #175 and #179.

SvetlanaUP commented 9 months ago

@tosfos I just now tried to reproduce it, without success. I'll let you know if it happens again and record it immediately.