waldronlab / BugSigDBcuration

For documenting issues related to BugSigDB curation.
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Modulation of the Gut Microbiota in Memory Impairment and Alzheimer’s Disease via the Inhibition of the Parasympathetic Nervous System #267

Closed Omabekee closed 3 months ago

Omabekee commented 6 months ago

Modulation of the Gut Microbiota in Memory Impairment and Alzheimer’s Disease via the Inhibition of the Parasympathetic Nervous System -- Park and Wu -- International Journal of Molecular Sciences https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9657043/

samreen-19 commented 6 months ago

Hello, can I be assigned to curate this paper please?

SvetlanaUP commented 6 months ago

@samreen-19 is this study ready for review?

samreen-19 commented 6 months ago

Yes @SvetlanaUP https://bugsigdb.org/Study_997 Here's my curation

Scholarpat commented 3 months ago

Here's a revised version of your write-up:


Hi @SvetlanaUP,

Here are the changes I made:

Experiments 1-3 are part of a meta-analysis that selected and combined data from four different human AD studies. The DNA was amplified using 16S amplicon primers in the V3-V4 region for three studies and in the V2 region for one study. Because this is a meta-analysis combining data from different studies with different hypervariable regions of the 16S sequencing, I left out this field in the curation and included it in the discussion/talk page.

The groups for each experiment were not properly organized. I've corrected this and curated their signatures accordingly. I've also curated Experiment 6 (and one signature for it, which is not displaying; I have reported this issue) which was not initially curated.

Each experiment is supposed to have one signature each. Please kindly delete the following:

Thank you very much. This curation is complete.

SvetlanaUP commented 3 months ago

https://bugsigdb.org/Study_997 reviewed.