waldronlab / BugSigDBcuration

For documenting issues related to BugSigDB curation.
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Metagenomic, metabolomic, and lipidomic shifts associated with fecal microbiota transplantation for recurrent Clostridioides difficile infection #511

Open SvetlanaUP opened 1 month ago

SvetlanaUP commented 1 month ago

Metagenomic, metabolomic, and lipidomic shifts associated with fecal microbiota transplantation for recurrent Clostridioides difficile infection – Arthur S. McMillan – mSphere https://journals.asm.org/doi/10.1128/msphere.00706-24

Zzee2 commented 1 month ago

Hi @SvetlanaUP I would love to take this up. could you assign it to me. thanks

PATIENCE-ONAH commented 1 month ago

Hi @Zzee2 , how is your curation going?. I'm available to collaborate with you. Do let me know if you need any help.

SvetlanaUP commented 1 month ago

@PATIENCE-ONAH you got your assignment, please check https://github.com/waldronlab/BugSigDBcuration/issues/354

PATIENCE-ONAH commented 1 month ago

Yes, I have already commented before I saw your reply. I have taken up the work. Thank you @SvetlanaUP

AishatBolarinwa commented 1 month ago

Hello @Zzee2 How is this curation going? Would you like me to assist in any way?

You can find me on the slack channel @Bolarinwa Aishat

KateRasheed commented 1 month ago

Good morning @Zzee2 . Trust you are doing well. I entered the two PMIDs of your article and noticed you are yet to create a study. Are you experiencing any blocker? Please feel free to reach out to us for assistance as "support systems". We are here to support you in any way.

SvetlanaUP commented 1 month ago

@KateRasheed what do you mean by "two PMIDs"? Every paper has only one PMID.

KateRasheed commented 1 month ago

Screenshot_20241024-084519 @SvetlanaUP I took a screenshot.

One of the articles is PMC.

SvetlanaUP commented 1 month ago

@KateRasheed first one is the study published as a preprint (bioRxiv) and the second one is one that we curate: paper published in the peer reviewed journal (mSphere)

Note: there is even red highlighted "Update: in mSphere" indicating that the preprint is now published in the peer-reviewed journal

KateRasheed commented 1 month ago

Ohh. Well noted. Thank you @SvetlanaUP . I have seen the update now.

SvetlanaUP commented 1 month ago

@KateRasheed @AishatBolarinwa please do together this curation with @Zzee2 , thanks!

AishatBolarinwa commented 1 month ago

Noted ma'am @SvetlanaUP I'll reach out to them right away.

Thank you

AishatBolarinwa commented 1 month ago

This is insightful. Thank you.

On Thu, 24 Oct 2024 at 08:52, Svetlana Ugarcina Perovic < @.***> wrote:

@KateRasheed https://github.com/KateRasheed first one is the study published as a preprint (bioRxiv) and the second one is one that we curate: paper published in the peer reviewed journal (mSphere)

— Reply to this email directly, view it on GitHub https://github.com/waldronlab/BugSigDBcuration/issues/511#issuecomment-2434552999, or unsubscribe https://github.com/notifications/unsubscribe-auth/A2FLZRNEVJFASGOYKI6WYDLZ5CRNBAVCNFSM6AAAAABQHL3T4OVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDIMZUGU2TEOJZHE . You are receiving this because you commented.Message ID: @.***>

KateRasheed commented 1 month ago

Thank you @SvetlanaUP. We'll get to work right away.

AishatBolarinwa commented 1 month ago

@KateRasheed @AishatBolarinwa please do together this curation with @Zzee2 , thanks!

Thank you

@Zzee2 Kindly drop your slack username so we can reach out to you. Thank you.

KateRasheed commented 3 weeks ago

Good day @SvetlanaUP . This study is ready for review

https://bugsigdb.org/Study_1186

@AishatBolarinwa