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waldronlab / MultiAssayExperiment

Bioconductor package for management of multi-assay data
https://waldronlab.io/MultiAssayExperiment/
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lintr-bot configuration #163

Closed LiNk-NY closed 5 years ago

LiNk-NY commented 8 years ago

Hi Jim, @jimhester I'm not sure how this is configured. It started appearing automatically after commits (e.g., https://github.com/LiNk-NY/MultiAssayExperiment/commit/7f46227f039f591a0fe1ca2b69bca700a1e7d917) Is it coming from codecov?

I would like to have a Bioconductor lintr configuration.

Thanks, Marcel

jimhester commented 8 years ago

It is coming from the lint step in https://github.com/vjcitn/MultiAssayExperiment/blob/4ef3320e5e4d717cd9aceedff55e4d4b3e7dfbf5/wercker.yml#L7

https://github.com/jimhester/lintr#non-failing-lints has some sparse documentation.

Linting with complete bioconductor style probably needs a few new linters written, to start with you need to turn off the camelCase linter and turn on the snake case one for instance. https://github.com/jimhester/lintr#project-configuration has some documentation on configuring it, you should be able to add a .lintr file to the project directory to add your configuration.

LiNk-NY commented 8 years ago

Great, thanks for the quick response!

stale[bot] commented 5 years ago

This issue has been automatically marked as stale because it has not had any recent activity. It will be closed if no further activity occurs. Thank you for your contributions.