mae2maf

[PoisonAlien]

Hi Marcel, Here are the changes.

Example:

library(maftools)

laml.maf = system.file("extdata", "tcga_laml.maf.gz", package = "maftools") #MAF file
laml.clin = system.file('extdata', 'tcga_laml_annot.tsv', package = 'maftools') #clinical data
laml = read.maf(maf = laml.maf, clinicalData = laml.clin)

#Convert to MAE
laml_mae = maftools::maf2mae(m = laml)

#Convert MAE to MAF
MultiAssayExperiment::MultiAssayExperimentToMAF(x = laml_mae)

[LiNk-NY]

Excellent ! Thanks!