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waldronlab / cBioPortalData

Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
https://waldronlab.io/cBioPortalData/
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Require R>4.2.0? #46

Closed Jeff-Gui closed 2 years ago

Jeff-Gui commented 2 years ago

When installing as described in this github homepage, there is an error message. ERROR: this R is version 4.1.2, package 'cBioPortalData' requires R >= 4.2.0

However, I think R has not been updated to 4.2.0 yet.

lwaldron commented 2 years ago

Hi @Jeff-Gui , the version on GitHub must be run with bioc-devel (https://www.bioconductor.org/developers/how-to/useDevel/), which depends on R-devel, which is currently 4.2.0. To use the release version of cBioPortalData that installs with the current Bioconductor and R releases, just do:

BiocManager::install("cBioPortalData")

I'll clarify this on the README.md.