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waldronlab / cBioPortalData

Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
https://waldronlab.io/cBioPortalData/
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Can we make the download URL customizable? #59

Closed SRodenburg closed 2 years ago

SRodenburg commented 2 years ago

Hello,

Currently the package is preconfigured to download from the cBio Amazon server: https://github.com/waldronlab/cBioPortalData/blob/b16ec9de5841a132cda1bc792a52dd7f44f3cbaa/R/cBioDataPack.R#L2

Would it be possible to make this URL customizable?

Thanks

LiNk-NY commented 2 years ago

Hi @SRodenburg

Sorry I missed the issue notification. I hope you were able to change the URL. Please tag me next time.

Best regards, Marcel

SRodenburg commented 2 years ago

Thanks for the reply. I noticed that you should be able to change the URL using option(). I missed that. Thanks!