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waldronlab / cBioPortalData

Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
https://waldronlab.io/cBioPortalData/
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Does the API provide download of variants? #66

Closed zhongguojie1998 closed 1 year ago

zhongguojie1998 commented 1 year ago

Hi cBioPortalData authors, thanks for developing such useful tool. May I ask if the cBioPortalData package provide API access to download data of variants on all patients of a gene, just like what we could do with the "Quick Search" on web portal? Sorry if I missed anything but it seems not clear on the API documentation. I'd really appreciate it if someone could help me with that, thank you!

LiNk-NY commented 1 year ago

Hi @zhongguojie1998 I do not know if there is an endpoint for this. It may just be a feature of the website. You will have to ask https://github.com/cbioportal/cbioportal