We found another (to my knowledge unpublished) dataset on SRA containing labelled samples from healthy and IBD patients in Cardiff, UK. I drafted a metadata tsv based on my understanding of the requirements. I haven't done the mimum/median read length yet, but I can do so if the rest of this looks good for inclusion.
@paolinomanghi would you merge then add the machine generated metadata? It looks like a nice find, even without age, sex, or publication, it does have IBD!
We found another (to my knowledge unpublished) dataset on SRA containing labelled samples from healthy and IBD patients in Cardiff, UK. I drafted a metadata tsv based on my understanding of the requirements. I haven't done the mimum/median read length yet, but I can do so if the rest of this looks good for inclusion.
The SRA runs for the dataset are located here:
https://www.ncbi.nlm.nih.gov/Traces/study/?query_key=10&WebEnv=MCID_6048f0b09791a01869656a42&o=acc_s%3Aa