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waldronlab / curatedMetagenomicDataCuration

Sample Metadata Curation for curatedMetagenomicData
https://waldronlab.io/curatedMetagenomicDataCuration/
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change PMID specifications #55

Closed schifferl closed 3 years ago

schifferl commented 3 years ago

The current PMID specification is almost right but the unpublished values creates a few issues for me in the R package, it would be better if these were just blank. The following changes to the template (and curated files) would be helpful.

requiredness: optional

allowedvalues: [0-9]{8}|unpublished -> [0-9]{8}

paolinomanghi commented 3 years ago

I have allowed NA instead of unpublished, and I have amended the two datasets for which the table said unpublished. I'm closing this