I am trying to get curated gene_families file for MetaCardis_2020 dataset using #
dataset <- curatedMetagenomicData("2022-10-19.MetaCardis_2020_a.gene_families", dryrun = FALSE , rownames = "long")$2022-10-19.MetaCardis_2020_a.gene_families` which is giving error as follow: Error in (function (cond) :
error in evaluating the argument 'x' in selecting a method for function 'query': Failed to collect lazy table.
Caused by error in db_collect():
! Arguments in ... must be used.
✖ Problematic argument:
• ..1 = Inf
ℹ Did you misspell an argument name?`.
same error is coming using
curatedMetagenomicData("2022-10-19.MetaCardis_2020_a.gene_families", dryrun = FALSE , rownames = "long") also. I am getting same error while using other datasets as well but earlier i got curated files using this same code.
I am trying to get curated gene_families file for MetaCardis_2020 dataset using #
dataset <- curatedMetagenomicData("2022-10-19.MetaCardis_2020_a.gene_families", dryrun = FALSE , rownames = "long")$2022-10-19.MetaCardis_2020_a.gene_families` which is giving error as follow:Error in (function (cond) : error in evaluating the argument 'x' in selecting a method for function 'query': Failed to collect lazy table. Caused by error indb_collect(): ! Arguments in...must be used. ✖ Problematic argument: • ..1 = Inf ℹ Did you misspell an argument name?`.same error is coming using
curatedMetagenomicData("2022-10-19.MetaCardis_2020_a.gene_families", dryrun = FALSE , rownames = "long")also. I am getting same error while using other datasets as well but earlier i got curated files using this same code.can you suggest how to fix this?