wanderine / BROCCOLI

BROCCOLI: Software for Fast fMRI Analysis on Many-Core CPUs and GPUs
GNU General Public License v3.0
113 stars 38 forks source link

[BIDS] Use 'trial_type' instead of cond* #24

Closed chrisgorgo closed 7 years ago

chrisgorgo commented 7 years ago

Currently broccolipipeline.sh is relying on existence of cond files which are not part of the BIDS standard. Instead you should query the trial_type column from the _events.tsv files to obtain similar information.

wanderine commented 7 years ago

The cond files are created by a call to BIDSto3col.sh

2016-08-31 17:55 GMT+02:00 Chris Filo Gorgolewski notifications@github.com :

Currently broccolipipeline.sh is relying on existence of cond files which are not part of the BIDS standard. Instead you should query the trial_type column from the _events.tsv files to obtain similar information.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/wanderine/BROCCOLI/issues/24, or mute the thread https://github.com/notifications/unsubscribe-auth/AEGryGsQ1K8mbGYtC9qHEiiSZdujCF0Kks5qlaQAgaJpZM4Jxxih .

Anders Eklund, PhD

chrisgorgo commented 7 years ago

My bad!