Broccoli for Windows

[BertramW]

Hi,

1: In NITRC BROCCOLI is specified as ' Operating System: Windows, POSIX/UNIX-like'. How I can get it run in Windows?

2: Running RandomiseGroupLevel I got the message 'TFCE is currently disabled'. Will it be enabled again? If so, when?

Best, Bertram

[wanderine]

For Windows you have to run BROCCOLI through Matlab, as there is no terminal in Windows. Here are some precompiled mex-files

https://github.com/wanderine/BROCCOLI/tree/master/compiled/Matlab/Windows

Yes TFCE will be enabled again, but I don't know when. The main problem is the low speedup compared to randomise, since many clusterings have to be performed. For low cluster defining thresholds (giving large clusters), the parallel clustering used in BROCCOLI seems to be slower than in randomise.

2017-01-11 15:45 GMT+01:00 BertramW notifications@github.com:

Hi,

1: In NITRC BROCCOLI is specified as ' Operating System: Windows, POSIX/UNIX-like'. How I can get it run in Windows?

2: Running RandomiseGroupLevel I got the message 'TFCE is currently disabled'. Will it be enabled again? If so, when?

Best, Bertram

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/wanderine/BROCCOLI/issues/32, or mute the thread https://github.com/notifications/unsubscribe-auth/AEGryOvT4SuFuBZzaji0oTUNxJ3Mjcsoks5rROsNgaJpZM4LgqJQ .

-- Anders Eklund, PhD

[BertramW]

body { font-family:'Times New Roman'; font-size:16px}

Many thanks for answering so quickly.Do the mex-files support GPUs? If so, which Matlab version is needed?Best,BertramOn Fri, 13 Jan 2017 11:46:49 +0100, Anders Eklund notifications@github.com wrote:For Windows you have to run BROCCOLI through Matlab, as there is no terminal in Windows. Here are some precompiled mex-files

https://github.com/wanderine/BROCCOLI/tree/master/compiled/Matlab/Windows

Yes TFCE will be enabled again, but I don't know when. The main problem is the low speedup compared to randomise, since many clusterings have to be performed. For low cluster defining thresholds (giving large clusters), the parallel clustering used in BROCCOLI seems to be slower than in randomise.

2017-01-11 15:45 GMT+01:00 BertramW notifications@github.com:

Hi,

1: In NITRC BROCCOLI is specified as ' Operating System: Windows, POSIX/UNIX-like'. How I can get it run in Windows?

2: Running RandomiseGroupLevel I got the message 'TFCE is currently disabled'. Will it be enabled again? If so, when?

Best, Bertram

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/wanderine/BROCCOLI/issues/32, or mute the thread https://github.com/notifications/unsubscribe-auth/AEGryOvT4SuFuBZzaji0oTUNxJ3Mjcsoks5rROsNgaJpZM4LgqJQ .

-- Anders Eklund, PhD

—You are receiving this because you authored the thread.Reply to this email directly, view it on GitHub, or mute the thread.

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[wanderine]

The mex-files support any OpenCL device (CPU,GPU) for which you have installed an OpenCL driver. I'm not sure which Matlab version that is required.

2017-01-13 19:07 GMT+01:00 BertramW notifications@github.com:

body { font-family:'Times New Roman'; font-size:16px}

Many thanks for answering so quickly.Do the mex-files support GPUs? If so, which Matlab version is needed?Best,BertramOn Fri, 13 Jan 2017 11:46:49 +0100, Anders Eklund notifications@github.com wrote:For Windows you have to run BROCCOLI through Matlab, as there is no terminal in Windows. Here are some precompiled mex-files

https://github.com/wanderine/BROCCOLI/tree/master/compiled/Matlab/Windows

Yes TFCE will be enabled again, but I don't know when. The main problem is the low speedup compared to randomise, since many clusterings have to be performed. For low cluster defining thresholds (giving large clusters), the parallel clustering used in BROCCOLI seems to be slower than in randomise.

2017-01-11 15:45 GMT+01:00 BertramW notifications@github.com:

Hi,

1: In NITRC BROCCOLI is specified as ' Operating System: Windows, POSIX/UNIX-like'. How I can get it run in Windows?

2: Running RandomiseGroupLevel I got the message 'TFCE is currently disabled'. Will it be enabled again? If so, when?

Best, Bertram

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/wanderine/BROCCOLI/issues/32, or mute the thread https://github.com/notifications/unsubscribe-auth/ AEGryOvT4SuFuBZzaji0oTUNxJ3Mjcsoks5rROsNgaJpZM4LgqJQ .

-- Anders Eklund, PhD

—You are receiving this because you authored the thread.Reply to this email directly, view it on GitHub, or mute the thread.

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— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/wanderine/BROCCOLI/issues/32#issuecomment-272505940, or mute the thread https://github.com/notifications/unsubscribe-auth/AEGryADnVSXmUYd_brZnbzs3F8VgjAfFks5rR714gaJpZM4LgqJQ .

-- Anders Eklund, PhD