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wanderine / BROCCOLI

BROCCOLI: Software for Fast fMRI Analysis on Many-Core CPUs and GPUs
GNU General Public License v3.0
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RandomiseGroupLevel for repeated measures #50

Open idotoren opened 6 years ago

idotoren commented 6 years ago

Hi, I was wondering if it is possible to control for permutations within groups/subjects. This is possible in FSL randomise by adding -e design.grp file, which basically restrict randomisation within a group (so for repeated measures you need to set a different group identifier (e.g. number) for each subject). many thanks

Ido

wanderine commented 6 years ago

Hi,

it is not possible at the moment, but you can in FSL randomise save the permutations as a text file (option -P) and then read them into BROCCOLI (option -permutationfile).

2018-05-01 13:07 GMT+02:00 idotoren notifications@github.com:

Hi, I was wondering if it is possible to control for permutations within groups/subjects. This is possible in FSL randomise by adding -e design.grp file, which basically restrict randomisation within a group (so for repeated measures you need to set a different group identifier (e.g. number) for each subject). many thanks

Ido

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idotoren commented 6 years ago

Thanks for the quick reply, I'll try that.

Ido