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wangshisheng / NAguideR

NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses
MIT License
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final check is not OK, error: missing value where TRUE/FALSE needed #4

Closed ihorrible closed 1 year ago

ihorrible commented 2 years ago

Hi, everyone ! I use a local installation of NAguiderR and I have never seen this type of error before: missing value where TRUE/FALSE needed. There is nothing unusual in this human data. All preliminary check were fine:

Снимок imput data check NAplot_bycolumn_1650204928.51691_after_removal426&8.pdf

ihorrible commented 2 years ago

Should I ignore this error? As missing values I have an empty cells. May be I should add zero instead of empty cells?

Warning: Error in if: missing value where TRUE/FALSE needed 98: renderUI [C:\Users\iataraskin\Documents\R\win-library\4.1\NAguideR\NAguideRapp/app.R#3429] 97: func 84: renderFunc 83: output$finalcheck2 2: shiny::runApp 1: NAguideR_app

ihorrible commented 2 years ago

It seems to me that problem is related with the following: ![Uploading Снимок.PNG…]()

wangshisheng commented 2 years ago

Hi. I think one of the proteomic criteria is NaN, so NAguideR cannot decide what the exact value. You can just ignore this error and do not take those criteria with missing values into consideration or just add 0 instead as you mentioned. I will update these codes later.

Shisheng