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wanpinglee / MOSAIK

reference-guided aligner for next-generation sequencing technologies
http://code.google.com/p/mosaik-aligner/
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How may threads is required to run a mosaik aligner ? #34

Open pinninti19 opened 6 years ago

pinninti19 commented 6 years ago

Hi

I would like to align exome dataset (PE reads,30 gb x 2) against hg38.fa . We have a server with 1 TB RAM, 4 processors with 128 threads. I tried from 10 to 100 threads (-p) still it showing me the segmentation fault.

How much threads or RAM is required for mosaik alignment process ?

Thanks!