warelab / sciapps

SciApps: a cloud-based platform for reproducible bioinformatics workflows
https://www.sciapps.org
Apache License 2.0
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Relative path problem #65

Closed liyawang closed 7 years ago

liyawang commented 7 years ago

When browsing 'Data Store', need a variable (storagePath) to define relative path.

For CSHL storage system, $storagePath='data.sciapps.org/example_data'

For CyVerse Data Store, $storagePath='/iplant/home/UserName/sci_data', also need to add a button to allow accessing community data: /iplant/home/shared

To do this, we need to update Agave system to point root folder one level up than example_data. When browsing files from App form, user needs to be directed to $storagePath and won't have right to access data above $storagePath.

All workflows need to be rebuilt since path are changed.

'example_data' need to be removed from filesInfo.js after these changes.

liyawang commented 7 years ago

Need to resolve issues related to ils

liyawang commented 7 years ago

Fixed