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warpem / warp

https://warpem.github.io/warp/
GNU General Public License v3.0
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issue with fs_motion_and_ctf (error: System.OverflowException: Arithmetic operation resulted in an overflow.) #296

Open zxxshower opened 2 hours ago

zxxshower commented 2 hours ago

Hi, We just encontered the error with fs_motion_and_ctf function. Here is what we can read from the report in terminal:

Connecting to workers... Connected to 5 workers Failed to process /fs/folder_path/warp_frameseries/Position_2_2_045_29.00_20240817_201823_EER.eer, marked as unselected Check logs in /fs/folder_path/warp_frameseries/logs for more info. Use the change_selection WarpTool to reactivate this item if required.

and the log file writes:

2024-11-20 10:58:38.204 Received "LoadStack", with 4 arguments, for GPU #6, 23723 MB free: 2024-11-20 10:58:42.316 Loaded stack: 4096, 4096, 31, normal, real, 1 A/px, ID = -1, 1 2024-11-20 10:58:42.317 Execution took 4.112 seconds 2024-11-20 10:58:42.317 2024-11-20 10:58:42.319 Received "MovieProcessMovement", with 2 arguments, for GPU #6, 23723 MB free: 2024-11-20 10:58:43.347 Processed movement for /fs/folder_path/warp_frameseries/Position_2_2_045_29.00_20240817_201823_EER.eer 2024-11-20 10:58:43.347 Execution took 1.027 seconds 2024-11-20 10:58:43.348 2024-11-20 10:58:43.350 Received "MovieExportMovie", with 2 arguments, for GPU #6, 23723 MB free: 2024-11-20 10:58:44.904 0: 804 2024-11-20 10:58:44.904 1: 5 2024-11-20 10:58:44.919 2: 20 2024-11-20 10:58:44.919 3: 1 2024-11-20 10:58:44.920 4: 759 2024-11-20 10:58:44.920 5: 0 2024-11-20 10:58:44.920 6: 0 2024-11-20 10:58:44.921 7: 6 2024-11-20 10:58:44.941 Exported movie for /fs/folder_path/warp_frameseries/Position_2_2_045_29.00_20240817_201823_EER.eer 2024-11-20 10:58:44.941 Execution took 1.580 seconds 2024-11-20 10:58:44.946 2024-11-20 10:58:44.949 Received "LoadStack", with 4 arguments, for GPU #6, 23723 MB free: 2024-11-20 10:58:45.051 Loaded stack: 4096, 4096, 1, normal, real, 1 A/px, ID = -1, 1 2024-11-20 10:58:45.100 Execution took 0.151 seconds 2024-11-20 10:58:45.119 2024-11-20 10:58:45.146 Received "MovieProcessCTF", with 2 arguments, for GPU #6, 23723 MB free: 2024-11-20 10:58:47.765 System.OverflowException: Arithmetic operation resulted in an overflow. 2024-11-20 10:58:47.765 at Warp.Cubic1D..ctor(float2[] data) in /usr/share/miniconda/envs/package-build/conda-bld/warp_1728495487215/work/WarpLib/Cubic1D.cs:line 30 2024-11-20 10:58:47.765 at Warp.Cubic1D.FitCTF(float2[] data, Single[] simulation, Single[] zeros, Single[] peaks, Cubic1D& background, Cubic1D& scale) in /usr/share/miniconda/envs/package-build/conda-bld/warp_1728495487215/work/WarpLib/Cubic1D.cs:line 215 2024-11-20 10:58:47.765 at Warp.Movie.ProcessCTF(Image originalStack, ProcessingOptionsMovieCTF options) in /usr/share/miniconda/envs/package-build/conda-bld/warp_1728495487215/work/WarpLib/Movie.cs:line 1941 2024-11-20 10:58:47.765 at WarpWorker.WarpWorker.EvaluateCommand(NamedSerializableObject Command) in /usr/share/miniconda/envs/package-build/conda-bld/warp_1728495487215/work/WarpWorker/WarpWorker.cs:line 265

I don't have any idea why this happens, this eer file seems normal, and there is no error with this eer file during MotionCor + CtfFind in relion5. Thanks!

zxxshower commented 1 hour ago

By the way, all the rest eer files (900/901) finished without any error