Annotated hearts in Abdomen in public v2 dataset

wasserth / TotalSegmentator

Tool for robust segmentation of >100 important anatomical structures in CT and MR images

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Annotated hearts in Abdomen in public v2 dataset #299

Open marcus-wirtz-snkeos opened 4 months ago

marcus-wirtz-snkeos commented 4 months ago

Hey there,

there seems to be a systematic error with the annotated v201 dataset on https://zenodo.org/records/10047292 (md5: fe250e5718e0a3b5df4c4ea9d58a62fe), where the heart is inside the abdomen (below diaphragm) for multiple cases. I analyzed about 500 cases of the dataset and found 3 such error modes:

s0143
s0201 (already fixed in https://github.com/wasserth/TotalSegmentator/issues/245)
s1196

You have a timeline on when a new dataset release can be expected?

Best, Marcus

wasserth commented 4 months ago

Thanks for pointing out these errors. I will fix these. A release of the dataset is more complicated than a new software release unfortunately. Therefore, I can not do them very often. It will take a few more months for the next release.