search

wasserth / TotalSegmentator

Tool for robust segmentation of >100 important anatomical structures in CT and MR images
Apache License 2.0
1.55k stars 256 forks source link

Contrast phase independent prediction #392

Open rakshrma opened 1 week ago

rakshrma commented 1 week ago

totalseg_get_phase.get_ct_contrast_phase method runs the segmentation for contrast prediction. For cases, where the segmentations are already generated and user is only interested to get contrast phase, it will be very useful to input earlier generated segmentations to this method without re-computation of segmentation. Are you currently working on enabling this feature? If not, I'll be happy to contribute to that.

wasserth commented 6 days ago

The running of the segmentation model for the contrast phase segmentation is quite fast since it only uses a few ROIs and a low resolution model. The runtime you save would not be too big. Therefore this was not on the agenda so far.