waynebhayes / SANA

Simulating Annealing Network Aligner
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Implemented rudimentary multipartite mode #102

Closed rasulsafa closed 4 years ago

rasulsafa commented 4 years ago

In this pull request, I've implemented a rudimentary multipartite mode. It's enabled by passing the parameter -multipartite along with an integer, the number of partitions. I created a format to represent multipartite edge lists. The basic format is tab-separated nodes, with k columns, k being the number of partitions. A tripartite edge list would look like this: image

It is not compatible with Pareto mode.