search

wdecoster / NanoPlot

Plotting scripts for long read sequencing data
http://nanoplot.bioinf.be
MIT License
437 stars 47 forks source link

NanoPlot crash #214

Closed Maria-sdu closed 4 years ago

Maria-sdu commented 4 years ago

NanoPlot_20201021_1126.log

I am trying to run NanoPlot on data from MinION sequencing of cfDNA basecalled with Guppy. I have tried with sequencing summary text file and fastq file, but each time it crashes. I have updated NanoPlot, but that didn't help. I do get some plots out before it crashes but not all, any idea as to why it keeps crashing?

wdecoster commented 4 years ago

Hi,

The same problem is reported in https://github.com/wdecoster/NanoPlot/issues/201 Please downgrade seaborn to 0.10.1.

Wouter