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wdecoster / NanoPlot

Plotting scripts for long read sequencing data
http://nanoplot.bioinf.be
MIT License
413 stars 47 forks source link

Format of output figures #262

Closed rivera10 closed 3 years ago

rivera10 commented 3 years ago

Hello,

I was running the tool and I got this error

NanoPlot: error: unrecognized arguments: -f pdf

I am using NanoPlot 1.36.2. Does this version removes the --format argument? It is not listed in the help as in other versions.

Thanks for such great tool.

Best, Ramon

iliasbukraa commented 3 years ago

Hi @rivera10, thank you for your trust in Nanoplot! The -f/--format option has been temporarily disabled, maybe @wdecoster can expand on what the next steps are for outputting results?

wdecoster commented 3 years ago

Yes, we should bring this option back, and that shouldn't be too hard.

wdecoster commented 3 years ago

Thanks for your patience, -f/--format is back in NanoPlot v1.37.0, which is now available through pip and presumably soon through conda.

rivera10 commented 3 years ago

Great, thanks!