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wdecoster / NanoPlot

Plotting scripts for long read sequencing data
http://nanoplot.bioinf.be
MIT License
407 stars 48 forks source link

Feature Request: Additional Quality Cutoffs #305

Closed atrull314 closed 1 year ago

atrull314 commented 1 year ago

Hi,

We've been evaluating some nanopore data with the newer chemistries. We are seeing higher qualities overall, and think the ">Q15" block would benefit from being broken up more as the technology continues to evolve.

Is there anyway that a feature could be added so that additional quality cutoffs could be added in the NanoStats.txt file that is generated? Preferably, it'd be nice if the cutoffs were able to be entered as an optional parameter by the user to provide a degree of customization.

Thanks!

wdecoster commented 1 year ago

Thanks for the suggestion, but this is (in the current implementation) not trivial to make it customizable by the user.