search

wdecoster / NanoPlot

Plotting scripts for long read sequencing data
http://nanoplot.bioinf.be
MIT License
419 stars 47 forks source link

Error in running nanoplot .Doesnot produce combined result file. #344

Closed ap1438 closed 11 months ago

ap1438 commented 11 months ago

I was using it previously without any error but this time its giving error. I installed it using conda.

`/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/nanoplotter/nanoplotter_main.py:283: UserWarning:

distplot is a deprecated function and will be removed in seaborn v0.14.0.

Please adapt your code to use either displot (a figure-level function with similar flexibility) or histplot (an axes-level function for histograms).

For a guide to updating your code to use the new functions, please see https://gist.github.com/mwaskom/de44147ed2974457ad6372750bbe5751

alpha=0.8)) /vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/nanoplotter/nanoplotter_main.py:308: UserWarning:

distplot is a deprecated function and will be removed in seaborn v0.14.0.

Please adapt your code to use either displot (a figure-level function with similar flexibility) or histplot (an axes-level function for histograms).

For a guide to updating your code to use the new functions, please see https://gist.github.com/mwaskom/de44147ed2974457ad6372750bbe5751

alpha=0.8))

If you read this then NanoPlot 1.32.1 has crashed :-( Please try updating NanoPlot and see if that helps...

If not, please report this issue at https://github.com/wdecoster/NanoPlot/issues If you could include the log file that would be really helpful. Thanks!

Traceback (most recent call last): File "/vol/pac/Software/anaconda3/envs/nanoplot/bin/NanoPlot", line 10, in sys.exit(main()) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/nanoplot/NanoPlot.py", line 101, in main plots = make_plots(datadf, settings) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/nanoplot/NanoPlot.py", line 169, in make_plots plot_settings=plot_settings) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/nanoplotter/nanoplotter_main.py", line 169, in scatter joint_kws={"s": 1}) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/seaborn/axisgrid.py", line 2255, in jointplot grid.plot_joint(scatterplot, joint_kws) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/seaborn/axisgrid.py", line 1826, in plot_joint func(x=self.x, y=self.y, kwargs) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/seaborn/relational.py", line 761, in scatterplot p.plot(ax, kwargs) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/seaborn/relational.py", line 573, in plot points = ax.scatter(x=x, y=y, *kws) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/matplotlib/init.py", line 1414, in inner return func(ax, map(sanitize_sequence, args), **kwargs) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/matplotlib/axes/_axes.py", line 4467, in scatter collection.update(kwargs) File "/vol/pac/Software/anaconda3/envs/nanoplot/lib/python3.7/site-packages/matplotlib/artist.py", line 1067, in update raise AttributeError(f"{type(self).name!r} object " AttributeError: 'PathCollection' object has no property 'stat_func' `

wdecoster commented 11 months ago

This is a duplicate of https://github.com/wdecoster/NanoPlot/issues/222

Please downgrade your seaborn installation to 0.10.1