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wdecoster / chopper

MIT License
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Nanopore barcode/adapter detection #16

Closed Ge0rges closed 1 year ago

Ge0rges commented 1 year ago

Hello,

I was wondering if there are any plans to add Nanopore adapter and/or barcode detection.

Thanks

wdecoster commented 1 year ago

Hi,

Thanks for the suggestion. I understand that could be useful, but I don't think chopper will do a better job than e.g. guppy for adapter trimming.

Wouter

Ge0rges commented 1 year ago

That makes sense. I've just been wondering what the best way to QC guppy's effectiveness at finding adapters and barcodes is.