wdecoster / chopper

MIT License
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Filtering by timestamps #2

Open jodjo86 opened 1 year ago

jodjo86 commented 1 year ago

Hi,

It would be useful to add the ability to filter reads by timestamp. I believe this function would be possible only for ONT. A similar tool has already been developed in Rust (1).

One last thing ... it would be interesting to add the possibility to select the number of bases to keep (from the start of the read). Much like the CROP option of Trimmomatic (2).

1- https://github.com/angelovangel/nanotimes 2- https://github.com/usadellab/Trimmomatic

thank you for sharing your work

Joel

wdecoster commented 1 year ago

Thank you for your suggestions.