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wdecoster / chopper

MIT License
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Issue in Installation #21

Closed SelfShubham closed 10 months ago

SelfShubham commented 11 months ago

Installing via conda using command conda install -c bioconda chopper

Error Found conflicts! Looking for incompatible packages. This can take several minutes. Press CTRL-C to abort. failed

wdecoster commented 11 months ago

Could you please try again, but create a separate environment?

conda create -n chopper_env chopper

SelfShubham commented 11 months ago

with above suggested command. I am getting following error

PackagesNotFoundError: The following packages are not available from current channels:

SelfShubham commented 11 months ago

If I first create an environment than try to install using conda (conda install -c bioconda chopper). I am getting same error

Error Found conflicts! Looking for incompatible packages. This can take several minutes. Press CTRL-C to abort. failed

wdecoster commented 11 months ago

Is your conda installation recent? Are you using mamba?

Or could you just download the binary from the releases?

SelfShubham commented 11 months ago

using conda but installation is not recent. will try with binary file. Thank you

incoherentian commented 11 months ago

Is your conda installation recent? Are you using mamba?

Just throwing out there that I find mamba to solve more problems than it causes, and wouldn't usually suspect mamba :)

My chopper env and others are all created with 3y/o mamba and working fine!

Binary working though @SelfShubham ?

wdecoster commented 11 months ago

Oh yes I would indeed recommend using mamba rather than the normal conda.