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wdecoster / nanoQC

Quality control tools for nanopore sequencing data
GNU General Public License v3.0
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Seeking Assistance with nanoQC Tool Error #21

Closed Mitya-T closed 1 month ago

Mitya-T commented 6 months ago

Hello,

I am currently encountering an issue with the nanoQC tool. After installing it via pip install, I attempted to run a simple QC run on my fastq.gzfile using the command:

nanoQC -o . barcode03.fastq.gz

However, I received an error message after approximately 15 seconds of work:

Traceback (most recent call last): File "/opt/conda/bin/nanoQC", line 8, in <module> sys.exit(main()) File "/opt/conda/lib/python3.10/site-packages/nanoQC/nanoQC.py", line 43, in main save(gridplot(children=[[hist], seq_plots, qual_plots],TypeError: gridplot() got an unexpected keyword argument 'plot_width'

I would appreciate any suggestions or solutions to resolve this issue. Thank you in advance for your assistance.

Best Regards.

dnaase commented 5 months ago

i met the same problem.

Mars-fi commented 1 month ago

I also met this problem. Is there any solution?

wdecoster commented 1 month ago

Thank you for your patience. This should be solved in v0.10.0!