Would it be possible to implement plots for GC% too?

wdecoster / nanoQC

Quality control tools for nanopore sequencing data

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Would it be possible to implement plots for GC% too? #9

Closed mahesh-panchal closed 1 year ago

mahesh-panchal commented 6 years ago

Hi,

GC% is often a useful QC metric. Would it be possible to also implement plots for GC% distribution, GC% distribution vs Length, and GC% distribution vs Quality?

Regards, Mahesh.

wdecoster commented 6 years ago

Thanks for your suggestion. I think adding this to NanoQC would be easier and fit better ( https://github.com/wdecoster/NanoQC).

Since I'm at the end of my PhD I don't think I will have time for that soon but I welcome any contributions.

Cheers, Wouter