weberlab-hhu / Helixer

Using Deep Learning to predict gene annotations
GNU General Public License v3.0
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OSError: [Errno 9] Bad file descriptor #133

Open ZhangPY-bioinformatics opened 3 weeks ago

ZhangPY-bioinformatics commented 3 weeks ago

When I predict the base category, it will report an error at the end: OSError: [Errno 9] Bad file descriptor. After many experiments, the size of the genomic data ranges from tens of kb to several G, and the error will only be reported at the last moment. It seems that the file system is closed in advance when the code is about to run. This may cause about tens of kb of data to be written less in the predictions.h5 file? Or the content of the last seq_id is not written.