webyrd / mediKanren

Proof-of-concept for reasoning over the SemMedDB knowledge base, using miniKanren + heuristics + indexing.
MIT License
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Add tissue-specific filter #15

Open mattmight opened 6 years ago

mattmight commented 6 years ago

Given a list of gene names (and maybe metabolites too), filter those that have high expression in a particular tissue type.

This would be particularly useful for the output.

For example, "restrict output to all genes highly expressed in the uterus."

[This came up as a request during the May hackathon working with an SME.]