weecology / bbs-forecasting

Research on forecasting using Breeding Bird Survey data
MIT License
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Pacman isn't working for me #258

Closed davharris closed 6 years ago

davharris commented 6 years ago

I'm not sure how to interpret all of the errors/warnings below, but it looks like I'm having trouble with both RCurl (possibly) and MODISTools (definitely). Possibly also kernelspec for Jupyter, but I don't think so.

Does anyone else get these when they try to run the installation script?

> source("install-packages.R")
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.4/RCurl_1.95-4.10.tgz'
Content type 'application/x-gzip' length 893395 bytes (872 KB)
==================================================
downloaded 872 KB

The downloaded binary packages are in
    /var/folders/2h/z2yxt__92bsc_pj762qrp7_r0000gn/T//RtmpRECz5L/downloaded_packages

RCurl installed
[InstallKernelSpec] Removing existing kernelspec in /Users/davidharris/Library/Jupyter/kernels/ir
[InstallKernelSpec] Installed kernelspec ir in /Users/davidharris/Library/Jupyter/kernels/ir
Warning messages:
1: In .registerS3method(fin[i, 1], fin[i, 2], fin[i, 3], fin[i, 4],  :
  restarting interrupted promise evaluation
2: In get(method, envir = home) :
  restarting interrupted promise evaluation
3: In get(method, envir = home) : internal error -3 in R_decompress1
4: In pacman::p_load(dplyr, forecast, ggplot2, Hmisc, tidyr, mgcv,  :
  Failed to install/load:
RCurl
5: In pacman::p_load_gh("seantuck12/MODISTools", "ropensci/rdataretriever") :

Failed to install/load:
seantuck12/MODISTools
davharris commented 6 years ago

update: starting a new R session fixed the problem 🤷‍♂️