Add simple EDM model - Githubissues

weecology / portalcasting

Model development, deployment, and evaluation for forecasting Portal ecosystem dynamics

https://weecology.github.io/portalcasting

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Closed skmorgane closed 5 years ago

skmorgane commented 5 years ago

Spin-up project for @ethanwhite to learn portalcasting. EDMs are a good data-driven starting point for forecasting.

ha0ye commented 5 years ago

Ongoing work to be done in the EDM branch, started by @ethanwhite; see #149

[x] create demo EDM model and script
[x] check format for saved outputs:
- what components are needed to support ensemble / evaluation?
- what metadata / model params should be saved?
[x] add / check dependencies to add to portalcasting for the model(s) to run
[x] add tests

ha0ye commented 5 years ago

Seems to be working. (i.e. the following code runs)

library(portalcasting)
main <- tempdir()
setup_sandbox(main = main)
portalcast(main = main, models = "simplexEDM", verbose = TRUE)

ha0ye commented 5 years ago

juniperlsimonis commented 5 years ago

done with #141