ethanwhite
commented
9 years ago I hadn't gotten the data files into the Dropbox folder yet. They should be syncing across now. I modified the headers from the White et al. 2012 files so that I could easily import them all into the same dataframe so I needed to make a new copy.
embaldridge
Am I missing a dependency, or using an old version or something? I did update macroecotools, so I know that's not it. I'm also using the Enthought distribution on this machine, if I remember correctly. [evaluate sad_neutral_analysis.py] Importing Actinopterygii data Traceback (most recent call last): File "/usr/lib/wingide-101-4.1/src/debug/tserver/_sandbox.py", line 69, in
File "/usr/lib/wingide-101-4.1/src/debug/tserver/_sandbox.py", line 34, in import_data
File "/usr/local/lib/python2.7/dist-packages/pandas-0.13.1-py2.7-linux-x86_64.egg/pandas/io/parsers.py", line 420, in parser_f
return _read(filepath_or_buffer, kwds)
File "/usr/local/lib/python2.7/dist-packages/pandas-0.13.1-py2.7-linux-x86_64.egg/pandas/io/parsers.py", line 218, in _read
parser = TextFileReader(filepath_or_buffer, kwds)
File "/usr/local/lib/python2.7/dist-packages/pandas-0.13.1-py2.7-linux-x86_64.egg/pandas/io/parsers.py", line 502, in init
self._make_engine(self.engine)
File "/usr/local/lib/python2.7/dist-packages/pandas-0.13.1-py2.7-linux-x86_64.egg/pandas/io/parsers.py", line 610, in _make_engine
self._engine = CParserWrapper(self.f, self.options)
File "/usr/local/lib/python2.7/dist-packages/pandas-0.13.1-py2.7-linux-x86_64.egg/pandas/io/parsers.py", line 972, in init
self._reader = _parser.TextReader(src, **kwds)
File "/usr/local/lib/python2.7/dist-packages/pandas-0.13.1-py2.7-linux-x86_64.egg/pandas/parser.so", line 330, in pandas.parser.TextReader.cinit (pandas/parser.c:2965)
File "/usr/local/lib/python2.7/dist-packages/pandas-0.13.1-py2.7-linux-x86_64.egg/pandas/parser.so", line 557, in pandas.parser.TextReader._setup_parser_source (pandas/parser.c:5304)
IOError: File ./sad-data/chapter3/Actinopterygii_spab.csv