Missing import pandas as pd in LSTM_predict.py

weir12 / DENA

Deep learning model used to detect RNA m6a with read level based on the Nanopore direct RNA data.

MIT License

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Missing import pandas as pd in LSTM_predict.py #7

Closed FDallaPozza closed 2 years ago

FDallaPozza commented 2 years ago

Hi, I tried to run this command:

python LSTM_predict.py -i ${path_features} -m ${path_models} -o ${path_output} -p ${prefix_outfile} -d

and the -d option require the creation of a pandas data frame, however it seems that the LSTM_predict.py code doesn't do it, I had to modify and add "import pandas as pd" to avoid this error. Just to let you know.

Fabio

weir12 commented 2 years ago

Hi, Thanks for catching the problem and giving feedback in time! I have fixed it. Weir