Nanopolish instead of Tombo?

weir12 / DeepEdit

DeepEdit: single-molecule detection and phasing of A-to-I RNA editing events using Nanopore direct RNA sequencing

MIT License

14 stars 1 forks source link

Nanopolish instead of Tombo? #14

Closed itslittman closed 1 year ago

itslittman commented 1 year ago

Can I use nanopolish instead of Tombo for resquiggling?

weir12 commented 1 year ago

I'm sorry, but we can't switch to using that software. The algorithms, inputs, and outputs between the two are different, which means that they won't provide the same results.