Closed xmduumich closed 2 years ago
Sorry for my late reply.
We have just released a new version 1.0.0. It has computational efficiency improvements for both Step 1 and Step 2 for single-variant and set-based tests. We have created a new program github page https://github.com/saigegit/SAIGE with the documentation provided https://saigegit.github.io/SAIGE-doc/
The program will be maintained by multiple SAIGE developers there. Please feel free to try the version 1.0.0 and report issues if any.
Thanks! Wei
Dear Wei Zhou,
When running SAIGE-GENE we observed this error message:
ERROR: has N = 0 (mismatch with header block)
I cannot find documentation to interpret or troubleshoot what cause this. Could you help me to figure out what it means and how to resolve it?
Here I attach the .log file from running step2_SPAtests.R.
step2_GB_PDFF_4_7_QCed_chr22.log Thank you for your help!