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welch-lab / liger

R package for integrating and analyzing multiple single-cell datasets
GNU General Public License v3.0
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Seuratwrappers error #120

Closed cnk113 closed 5 years ago

cnk113 commented 5 years ago

Hello,

I was following the Seurat wrapper vignette for my data, but when I was running RunOptimizeALS I got this error:

Error: 'optimizeALS' is not an exported object from 'namespace:liger Any ideas why I am getting this error?

Thanks

vkozareva commented 5 years ago

Hello! Did you happen to try and install liger via CRAN with install.packages? Unfortunately there is another package called liger (and it's the one currently available through CRAN), and it doesn't have our functionality. If this is the case, you'll need to remove your current installation of liger and install our package with devtools::install_github('MacoskoLab/liger').

cnk113 commented 5 years ago

Ah I see, that solved the issue. Thanks.