Error in RunOptimizeALS function

welch-lab / liger

R package for integrating and analyzing multiple single-cell datasets

GNU General Public License v3.0

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Error in RunOptimizeALS function #134

Closed Abghaith closed 4 years ago

Abghaith commented 4 years ago

Hi, I get this error message when running this command :: ifnb <- RunOptimizeALS(ifnb, k = 20, lambda = 5, split.by = "stim") Erreur : 'optimizeALS' is not an exported object from 'namespace:liger'

jw156605 commented 4 years ago

Looks like you are using the SeuratWrappers package. Are both liger and seurat wrappers libraries properly loaded?

royfrancis commented 4 years ago

I get the same error. I am sure that liger and SeuratWrappers packages are loaded.

>> packageVersion("liger")
[1] ‘1.1’
>> packageVersion("SeuratWrappers")
[1] ‘0.1.0’

royfrancis commented 4 years ago

The issue is that I installed JEFworks/liger rather than MacoskoLab/liger.