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wellcometrust
/
grants_tagger
Tag grants with MeSH and other tags
MIT License
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4
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Bump numpy from 1.19.5 to 1.21.0
#181
dependabot[bot]
closed
2 years ago
1
Bump pillow from 8.4.0 to 9.0.0
#180
dependabot[bot]
closed
2 years ago
0
Return sparse probs in mesh models
#179
nsorros
closed
2 years ago
0
Refactor tests
#178
nsorros
opened
2 years ago
4
Save sparse weights in MeshTfidfSVM
#177
nsorros
closed
2 years ago
0
Add a way to test dvc repro on sample / test dataset
#176
nsorros
opened
2 years ago
2
Refactor cli
#175
pdan93
closed
2 years ago
4
Add year, journal in preprocess mesh
#174
nsorros
closed
2 years ago
0
Add Xtransformer experiments
#173
nsorros
closed
2 years ago
4
Fix travis and badges after switch to main
#172
nsorros
closed
2 years ago
0
Bump tensorflow from 2.4.0 to 2.5.2
#171
dependabot[bot]
closed
2 years ago
1
Rename science results in docs to science_results.md
#170
nsorros
closed
2 years ago
0
Xmas shortlist 🎄
#169
nsorros
closed
2 years ago
3
Fix dvc repro
#168
nsorros
closed
2 years ago
2
Feature/dvc dag to get grants and generate validation data
#167
aCampello
closed
2 years ago
9
Remove tensorflow from utils as its not used
#166
nsorros
closed
2 years ago
0
Don't import tensorflow on `grants_tagger.utils`
#165
aCampello
closed
2 years ago
0
Add split train/test step in preprocessing
#164
pdan93
closed
2 years ago
5
Add label binarizer creation to the preprocess step
#163
pdan93
closed
2 years ago
1
update readme with pip information and basic example of prediction
#162
pdan93
closed
2 years ago
9
Make a recipe to push to datalabs-prod
#161
aCampello
closed
1 year ago
4
Add Bert mesh experiments
#160
nsorros
closed
2 years ago
7
Add a new dag to generate validation data for xlinear
#159
aCampello
closed
2 years ago
1
Feature/script to pull new grants
#158
aCampello
closed
2 years ago
1
Optimise tune threshold
#157
nsorros
closed
2 years ago
3
Logger in tune threshold does not inherit from root
#156
nsorros
opened
2 years ago
0
Make default logger level to Error including loggers of libraries
#155
nsorros
closed
2 years ago
1
Fix train fail in tox
#154
nsorros
closed
2 years ago
1
Remove torch and core dependency from WellcomeML
#153
nsorros
closed
2 years ago
3
Grants tagger broken due to dependencies from WellcomeML
#152
nsorros
closed
2 years ago
1
Release 0.2.1
#151
nsorros
closed
2 years ago
3
Compute f1_score per label
#150
aCampello
closed
2 years ago
1
Experiment with increased n_gram and max_features for Tfidf transformation
#149
aCampello
closed
1 year ago
2
Format code with black and flake8
#148
nsorros
closed
3 years ago
0
Feature/fast tf idf
#147
aCampello
closed
2 years ago
5
Bump wellcomeml to 2.0.0
#146
aCampello
closed
2 years ago
1
Feature/xlinear finetune
#145
aCampello
closed
2 years ago
2
Use own Mesh Tree instead of learned one for XLinear
#144
aCampello
closed
1 year ago
1
Release 0.2.0 that includes XLinear
#143
nsorros
closed
2 years ago
3
train command fails locally due to ConnectionError
#142
nsorros
closed
2 years ago
0
Use tox for tests
#141
nsorros
closed
2 years ago
1
Ligher grants_tagger
#140
nsorros
closed
3 years ago
1
Add flake8 github action
#139
nsorros
closed
3 years ago
1
Auto format code with black
#138
github-actions[bot]
closed
3 years ago
1
Add autoblack github action
#137
nsorros
closed
3 years ago
5
Add papers document
#136
nsorros
closed
3 years ago
1
Implement fit of ScienceEnsemble and use in DVC
#135
nsorros
opened
3 years ago
0
sparse_y should live in MeshCNN and not CNNClassifier
#134
nsorros
closed
2 years ago
1
Stop using aws sync in favour of dvc pull
#133
nsorros
closed
2 years ago
3
Create literature document
#132
nsorros
closed
2 years ago
1
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