wells-wood-research / de-stress

DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
http://destressprotein.design
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Headless DE-STRESS fix: .env-headless file #145

Closed LunaPrau closed 5 months ago

LunaPrau commented 5 months ago

.env-headless file needs HEADLESS_DESTRESS_BATCH_SIZE defined. E.g.:

POSTGRES_PASSWORD=testpassword

GUNICORN_WORKERS=2 APP_PORT=8181

EVOEF2_BINARY_PATH=/dependencies_for_de-stress/EvoEF2/EvoEF2 DFIRE2_FOLDER_PATH=/dependencies_for_de-stress/DFIRE2-pair/ ROSETTA_BINARY_PATH=/dependencies_for_de-stress/rosetta_src_2020.08.61146_bundle/main/source/bin/score_jd2.linuxgccrelease AGGRESCAN3D_SCRIPT_PATH=/dependencies_for_de-stress/Aggrescan3D/aggrescan3D_cli_run.py

RQ_DASHBOARD_REDIS_URL=redis://redis:6379 RQ_DASHBOARD_PORT=8182

MAX_RUN_TIME=200 HEADLESS_DESTRESS_WORKERS=3 HEADLESS_DESTRESS_BATCH_SIZE=10

LunaPrau commented 5 months ago

PR #148

MichaelJamesStam commented 5 months ago

Resolved