wells-wood-research / timed-design

Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis
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multi chain output format #80

Closed sunal1996 closed 6 months ago

sunal1996 commented 6 months ago

At the moment, TIMED takes a multi-chain structure and gives the output by merging these chains together in a single chain format. For example, for a 368 aa protein consisting of 184 aa in chain A and 184 aa in chain B, we would like to have the output fasta to show predictions for individual chains. At the moment, we get single prediction for chain A with a length of 368.

This code overcomes this problem.