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wenbostar / PDV

PDV: an integrative proteomics data viewer
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How to add custom ions for spectrum annotation #32

Open umassspec opened 2 years ago

umassspec commented 2 years ago

Hi, Bo I tried to add custom fragment ions for spectrum annotation. But didn't find a way. Is it doable with the current version of PDV? Thanks! Xudong

wenbostar commented 2 years ago

What type of custom fragment ions do you want for annotation?

umassspec commented 2 years ago

Thanks for getting back so quickly! I have a couple of biotin and desthiobiotin fragment ions, which I want to label on MS2 spectra automatically. I played with the software and did not find a way. I also did not find instructions in the manual.

Thanks, Xudong

From: Bo @.> Sent: Saturday, March 5, 2022 11:58 PM To: wenbostar/PDV @.> Cc: umassspec @.>; Author @.> Subject: Re: [wenbostar/PDV] How to add custom ions for spectrum annotation (Issue #32)

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What type of custom fragment ions do you want for annotation?

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KaiLiCn commented 2 years ago

Hi Xudong,

Sorry for the late reply. Now PDV doesn't support this function. But I will add this good suggestion to my to-do list. The new version will be published later summer.

Kai