Hi Bo,
fread in data.table v1.110 (soon to be on CRAN) now recognizes "true" and "false" (all lower case) as a logical column automatically. So these two lines were resulting in empty results in dt_var, eventually ending up with this error :
Stage 4. HTML-based report generation.
None of SNV were identified!
Error in 1:dim(data)[1] : argument of length 0
Calls: easyRun -> reportGear -> .spplot
Execution halted
Hi Bo,
freadin data.table v1.110 (soon to be on CRAN) now recognizes "true" and "false" (all lower case) as a logical column automatically. So these two lines were resulting in empty results in dt_var, eventually ending up with this error :Hope it's ok to fix. Thanks and best, Matt